Ray M, Kats DJ, Moorkens J, Rai D, Shaar N, Quinones D, Vermeulen A, Mateo CM, Brewster RCL, Khan A, Rader B, Brownstein JS, Hron JD. Evaluating a Large Language Model in Translating Patient Instructions to Spanish Using a Standardized Framework. JAMA pediatrics 2025.
Hong C, Wen J, Zhang HG, Ayakulangara Panickan V, Yang DY, Chen AW, Xiong X, Wang X, Morris M, Morini S, Sangar R, Dey A, Samayamuthu MJ, Liao K, Bonzel CL, Tanukonda V, Maripuri M, Honerlaw J, Ho YL, Visweswaran S, Kohane IS, Cho K, Brat G, Xia Z, Cai T. Label efficient phenotyping for Long COVID using electronic health records. NPJ digital medicine 2025.
Noller K, Botsis T, Camara PG, Ciotti L, Cooper LA, Goecks J, Griffith M, Haas BJ, Ideker T, Karchin R, Kontos D, Lai J, Marcus D, Meyer CA, Naegle K, Pati S, Peters B, Pratt D, Raphael BJ, Reich M, Savova GK, Wright C, Fertig EJ, Bakas S. Informatics at the Frontier of Cancer Research. Cancer research 2025.
Wedel J, Kochupurakkal N, Kong SW, Bose S, Lee JW, Maslyar M, Alsairafi B, MacLeod K, Liu K, Zhang H, Komatsu M, Nakayama H, Bielenberg DR, Briscoe DM. Neuropilin-2 functions as a coinhibitory receptor to regulate antigen-induced inflammation and allograft rejection. The Journal of clinical investigation 2025.
Alsentzer E, Li MM, Kobren SN, Noori A, , Kohane IS, Zitnik M. Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases. NPJ digital medicine 2025.
Sztupinszki Z, Fiam R, Pipek O, Diossy M, Börcsök J, Prosz A, Csabai I, Szallasi Z. Polymerase theta expression is correlated with proliferative capacity but not with DNA repair deficiency status in solid tumors. NPJ precision oncology 2025.
Zhang L, Claggett BL, Marti-Castellote PM, Yates D, Mendelson MM, McMurray JJV, Zile MR, Chutkow W, Solomon SD, Cunningham JW. Effect of Neprilysin Inhibition on Plasma Proteins in Heart Failure With Mildly Reduced or Preserved Ejection Fraction. JACC. Heart failure 2025.
Gerdemann U, Kimler K, Warren MR, McGuckin C, Fleming RA, D'Ambra MR, Eran A, Albanese A, Chen E, Winschel MB, Cagnin L, Lane J, Gorfinkel L, Adams BW, Kwun J, Lanieri L, Hoban MD, Lamothe TL, Hyzy SL, Olson LM, Panoskaltsis-Mortari A, Prockop SE, Blazar BR, Kean LS, Tkachev V. A single dose of a CD137 antibody-drug conjugate protects nonhuman primate allogeneic HCT recipients against acute GVHD. Blood 2025.
Maisat W, Sandhu S, Kim S, Van Pelt H, Kong SW, Ibla J, Yuki K. Neutrophil gene downregulation is associated with postoperative organ dysfunction following pediatric cardiac surgery with cardiopulmonary bypass. Frontiers in cardiovascular medicine 2025.
Jiang M, Zhang Y, Liu T, Hong X, Kho AT, Li J, Gao Y, Sharma R, Celedon JC, McGeachie M, Weiss S, Tantisira KG, Li J. Circulating miRNAs and childhood asthma ICS response: a stratified analysis in the intervention arm of an RCT with vitamin D effect modification. Thorax 2025.
Kossowsky J, Greco C, Nestor BA, Koike C, Tacugue N, Baumer AM, Weitzman ER. Prevalence Rates, Perceptions of Risk, and Motivations for Nonmedical Cannabis Use in Pediatric Pain. JAMA network open 2025.
Siebert M, Bourgeois FT, Naudet F. ICMJE Should Create a Certification System to Identify Predatory Journals. JAMA 2025.
Pethani F, Chapman A, Conway M, Dai X, Bishay D, Choh VJX, He A, Lim SE, Ng HY, Mahony T, Yaacoub A, Karimi S, Spallek H, Dunn AG. Extracting social determinants of health from dental clinical notes. Applied clinical informatics 2025.
Healey E, Morato C, Murillo J, Kohane I. Heterogeneity of continuous glucose monitoring features and their clinical associations in a type 2 diabetes population. Diabetes, obesity & metabolism 2025.
Huang F, Hou J, Zhou N, Greco K, Lin C, Sweet SM, Wen J, Shen L, Gonzalez N, Zhang S, Liao KP, Cai T, Xia Z, Bourgeois FT, Cai T. Advancing the Use of Longitudinal Electronic Health Records: Tutorial for Uncovering Real-World Evidence in Chronic Disease Outcomes. Journal of medical Internet research 2025.
Sisk BA, Antes A, Bereitschaft C, Bourgeois F, DuBois J. Parental Access to Adolescent Online Healthcare Portals: Benefits, Problems, and Barriers. Applied clinical informatics 2025.
Ringold S, Ong MS, Tomlinson G, Natter MD, Schanberg LE, Del Gaizo V, Feldman BM, Murphy KL, Kimura Y, . Three-Year Outcomes and Latent Class Trajectory Analysis of the Childhood Arthritis and Rheumatology Research Alliance Polyarticular JIA Consensus Treatment Plans Study. Arthritis & rheumatology (Hoboken, N.J.) 2025.
Lim WX, Lim HM, Lee YK, Chuah CJW, Abdullah A, Ng CJ, Dunn AG. Appropriate trust in online health information is associated with information platform, commercial status, and misinformation in patients with high cardiovascular risk. Digital health 2025.
Toce MS, Michelson KA, Monuteaux MC, Bourgeois FT. Trends in Emergency Department Visits for Nonfatal Opioid Overdoses Among Adolescents. The Journal of adolescent health : official publication of the Society for Adolescent Medicine 2025.
Li X, Rossing M, Moisés da Silva A, Bose M, Gudjónsson T, Benada J, Thatte J, Johansen JV, Börcsök J, van der Gulden H, Song JY, Menezes R, Tajik A, Sena L, Szallasi Z, Frödin M, Jonkers J, Nielsen FC, Sørensen CS. G6PC3 promotes genome maintenance and is a candidate mammary tumor suppressor. JCI insight 2025.
Song TH, Clemente L, Pan X, Jang J, Santillana M, Lee K. Fine-grained forecasting of COVID-19 trends at the county level in the United States. NPJ digital medicine 2025.
Karabaliev M, Paarvanova B, Savova G, Tacheva B, Georgieva R. In Situ Monitoring of Morphology Changes and Oxygenation State of Human Erythrocytes During Surfactant-Induced Hemolysis. Cells 2025.
Lim A, Shearer FM, Sewalk K, Pigott DM, Clarke J, Ghouse A, Judge C, Kang H, Messina JP, Kraemer MUG, Gaythorpe KAM, de Souza WM, Nsoesie EO, Celone M, Faria N, Ryan SJ, Rabe IB, Rojas DP, Hay SI, Brownstein JS, Golding N, Brady OJ. The overlapping global distribution of dengue, chikungunya, Zika and yellow fever. Nature communications 2025.
Bao R, Weiss RJ, Bates SV, Song Y, He S, Li J, Bjornerud A, Hirschtick RL, Grant PE, Ou Y. PARADISE: Personalized and regional adaptation for HIE disease identification and segmentation. Medical image analysis 2025.
Wunnava S, Miller TA, Nathan M, Bourgeois FT. FDA Approval of Cardiac Valve Devices Implanted in a National Cohort of Pediatric Patients, 2016-2022. JAMA pediatrics 2025.
Guirguis J, Ramachandran V, Ann Vleugels R, Greenberg SA, Kim H, Kahn PJ, Oza V. Monoclonal antibody targeting IFNβ for the treatment of NXP2-positive ulcerative juvenile dermatomyositis. Pediatrics 2025.
Rader B, Walensky RP, Rogers WS, Brownstein JS. Revising US MMR Vaccine Recommendations Amid Changing Domestic Risks. JAMA 2025.
Buckley TA, Crowe B, Abdulnour RE, Rodman A, Manrai AK. Comparison of Frontier Open-Source and Proprietary Large Language Models for Complex Diagnoses. JAMA health forum 2025.
Seifert ME, Kho AT, Sheward L, Rodig N, Goldberg S, Diehl M, Zurakowski D, Mannon RB, Dharnidharka VR, Bestard O, Blydt-Hansen TD, Briscoe DM. Combination Automated Microfluidics Measurement of Urine C-C Motif Ligand 2, CXC-Motif Chemokine 9, CXC-Motif Chemokine 10, and Vascular Endothelial Growth Factor A for Monitoring Patients with a Kidney Transplant. Clinical journal of the American Society of Nephrology : CJASN 2025.
Healey E, Kohane I. Model-Based Insulin Sensitivity and Beta-Cell Function Estimation from Daily Continuous Glucose Monitoring. Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference 2024.
P Shanmugam S, Zhou Y, Stelter I, Hanlon T, Bekele RT, Bellmunt J, Szallasi Z, Mouw KW. Impact of DNA repair deficiency on sensitivity to antibody-drug conjugate (ADC) payloads in bladder cancer. Bladder cancer (Amsterdam, Netherlands) 2025.
Kong SW, Lee IH, Collen LV, Field M, Manrai AK, Snapper SB, Mandl KD. Discordance between a deep learning model and clinical-grade variant pathogenicity classification in a rare disease cohort. NPJ genomic medicine 2025.
Gao Y, Li R, Croxford E, Caskey J, Patterson BW, Churpek M, Miller T, Dligach D, Afshar M. Leveraging Medical Knowledge Graphs Into Large Language Models for Diagnosis Prediction: Design and Application Study. JMIR AI 2025.
Mandl KD. How AI Could Reshape Health Care-Rise in Direct-to-Consumer Models. JAMA 2025.
Alkuraya I, Almansa AS, Eleonu A, Avillach P, Poduri A, Srivastava S. Use of Computational Phenotypes for Predicting Genetic Subgroups of Cerebral Palsy. medRxiv : the preprint server for health sciences 2025.
Meyer AG, Lu F, Clemente L, Santillana M. A prospective real-time transfer learning approach to estimate influenza hospitalizations with limited data. Epidemics 2025.
Sanchez-Pinto LN, Daniels LA, Atreya M, Faustino EVS, Farris RWD, Geva A, Khemani RG, Rogerson C, Shah SS, Weiss SL, Bennett TD. Phoenix Sepsis Criteria in Critically Ill Children: Retrospective Validation Using a United States Nine-Center Dataset, 2012-2018. Pediatric critical care medicine : a journal of the Society of Critical Care Medicine and the World Federation of Pediatric Intensive and Critical Care Societies 2025.
Yao J, Perova Z, Mandloi T, Lewis E, Parkinson H, Savova G. Extracting Knowledge from Scientific Texts on Patient-Derived Cancer Models Using Large Language Models: Algorithm Development and Validation. bioRxiv : the preprint server for biology 2025.
Angelidou A, Koster JA, Sherman AC, McLoughlin C, Lalwani P, Kelly A, Saeed A, McEnaney K, Baden LR, Brogna M, Weitzman ER, Levy S, Dowling DJ, Levy O. Product and trial design considerations on the path towards a vaccine to combat opioid overdose. NPJ vaccines 2025.
Bose S, Do V, Testini C, Jadhav SS, Sailliet N, Kho AT, Komatsu M, Boneschansker L, Kong SW, Wedel J, Briscoe DM. Immunomodulation by allograft endothelial cells. Frontiers in transplantation 2025.
Rider NL, Li Y, Chin AT, DiGiacomo DV, Dutmer C, Farmer JR, Roberts K, Savova G, Ong MS. Evaluating large language model performance to support the diagnosis and management of patients with primary immune disorders. The Journal of allergy and clinical immunology 2025.
Jeon J, Cha Y, Hong YJ, Lee IH, Jang H, Ko S, Naumenko S, Kim M, Ryu HL, Shrestha Z, Lee N, Park TY, Park H, Kim SH, Yoon KJ, Song B, Schweitzer J, Herrington TM, Kong SW, Carter B, Leblanc P, Kim KS. Pre-clinical safety and efficacy of human induced pluripotent stem cell-derived products for autologous cell therapy in Parkinson's disease. Cell stem cell 2025.
Isakov O, Riesel D, Leshchinsky M, Shaham G, Reis BY, Keret D, Levi Z, Brenner B, Balicer R, Dagan N, Hayek S. Correction to: Development and Validation of a Colorectal Cancer Prediction Model: A Nationwide Cohort‑Based Study. Digestive diseases and sciences 2025.
DesRoches CM, Herzig SJ, Dong Z, Bourgeois F, Hurwitz I, Garcia A, Bell S. Patients and families reading their discharge summaries: A cross-sectional analysis of benefits, concerns, and implications. Journal of hospital medicine 2025.
Diao JA, Wadhera RK, Manrai AK. Statins for Primary Prevention of Cardiovascular Disease-Reply. JAMA 2025.
Sadun RE, Cooper JC, Belot A, Avcin T, Aggarwal A, Ainsworth J, Akinsete A, Ardoin SP, Beresford MW, Bortey L, Brunner HI, Chang JC, Ciurtin C, Daftary A, Eberhard B, Feldman CH, Hedrich CM, Hersh AO, Hiraki LT, Isenberg DA, Kamphuis S, Knight AM, Lambert L, Levy DM, Marks SD, Maxwell N, Migowa A, Moore K, Ozen S, Ramsey-Goldman R, Ravelli A, Reeve BB, Rubinstein TB, Saad-Magalhaes C, Sawhney S, Schanberg LE, von Scheven E, Scott C, Son MB, Tony G, Weitzman ER, Wenderfer SE, Woodside A, Lewandowski LB, Smith EM, . Development of CARRA/PReS-endorsed consensus Core and Expanded Datasets in childhood-onset systemic lupus erythematosus for international registry-based research. Annals of the rheumatic diseases 2025.
Elsallab M, Gillner S, Bourgeois FT. Comparison of Clinical Evidence Submitted to the FDA and EMA for Cell and Gene Therapies. JAMA internal medicine 2025.
Arifi D, Resch B, Santillana M, Guan WW, Knoblauch S, Lautenbach S, Jaenisch T, Morales I, Havas C. Geosocial Media's Early Warning Capabilities Across US County-Level Political Clusters: Observational Study. JMIR infodemiology 2025.
Kilim O, Olar A, Biricz A, Madaras L, Pollner P, Szállási Z, Sztupinszki Z, Csabai I. Histopathology and proteomics are synergistic for high-grade serous ovarian cancer platinum response prediction. NPJ precision oncology 2025.
Tiwari A, Hobbs BD, Sharma R, Li J, Kho AT, Amr S, Celedón JC, Weiss ST, Hersh CP, Tantisira KG, McGeachie MJ. Peripheral blood miRNAs are associated with airflow below threshold in children with asthma. Respiratory research 2025.